Biofactoid is a web-based system that empowers authors to capture and share machine-readable summaries of molecular-level interactions described in their publications.

Prefix
biofactoid
Keywords
biocuration database relationships
License
CC0-1.0
Links
Homepage Repository Request Discussion
Contact
Jeffrey Wong   0000-0002-8912-5699   jvwong
Pattern for Local Unique Identifiers

Local identifiers in Biofactoid should match this regular expression:
^[0-9a-fA-F]{8}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{12}$

Example Local Unique Identifier
fdb8a927-45c3-48b7-9743-cbb5e16837fa   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Biofactoid should match this regular expression:
^biofactoid:[0-9a-fA-F]{8}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{4}\-[0-9a-fA-F]{12}$

Example CURIE
biofactoid:fdb8a927-45c3-48b7-9743-cbb5e16837fa
Publications
2021 Author-sourced capture of pathway knowledge in computable form using Biofactoid.
Contributors
Reviewer
Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE biofactoid:fdb8a927-45c3-48b7-9743-cbb5e16837fa is used to demonstrate the provides available for biofactoid. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Biofactoid biofactoid https://biofactoid.org/document/fdb8a927-45c3-48b7-9743-cbb5e16837fa
Bioregistry bioregistry https://bioregistry.io/biofactoid:fdb8a927-45c3-48b7-9743-cbb5e16837fa