BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It published genome-scale metabolic networks into a single database with a set of standardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references individual metabolites.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BiGG Metabolite should match this regular expression:

Example Local Unique Identifier
12dgr161   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BiGG Metabolite should match this regular expression:

Example CURIE
Metaregistry BiGG Metabolite

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext BIGG.METABOLITE logo miriam bigg.metabolite
N2T Name-to-Thing logo n2t bigg.metabolite

Providers are various services that resolve CURIEs to URLs. The example CURIE bigg.metabolite:12dgr161 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BiGG Metabolite bigg.metabolite
Bioregistry bioregistry miriam
Name-to-Thing n2t