BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It more published genome-scale metabolic networks into a single database with a set of stardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references individual metabolotes.

Prefix
bigg.metabolite
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in BiGG Metabolite should match this regular expression:
^[a-z_A-Z0-9]+$

Example Local Unique Identifier
12dgr161   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from BiGG Metabolite should match this regular expression:
^bigg.metabolite:[a-z_A-Z0-9]+$

Example CURIE
bigg.metabolite:12dgr161
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for bigg.metabolite.

Registry Name Metaprefix External Prefix
Identifiers.org miriam bigg.metabolite
Name-to-Thing n2t bigg.metabolite
Prefix Commons prefixcommons BIGG.METABOLITE
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE bigg.metabolite:12dgr161 is used to demonstrate the provides available for bigg.metabolite. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
BiGG Metabolite bigg.metabolite http://bigg.ucsd.edu/models/universal/metabolites/12dgr161
Bioregistry bioregistry https://bioregistry.io/bigg.metabolite:12dgr161
Identifiers.org miriam https://identifiers.org/bigg.metabolite:12dgr161
Name-to-Thing n2t https://n2t.net/bigg.metabolite:12dgr161