Registry APID Interactomes Provider

APID (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). Interactome data includes a report on quality levels and coverage over the proteomes for each organism included. APID integrates PPIs from primary databases of molecular interactions (BIND, BioGRID, DIP, HPRD, IntAct, MINT) and also from experimentally resolved 3D structures (PDB) where more than two distinct proteins have been identified. This collection references protein interactors, through a UniProt identifier.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of apid.interactions.

Prefix
apid.interactions
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in APID Interactomes should match this regular expression:
^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$

Example Local Unique Identifier
P01116   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from APID Interactomes should match this regular expression:
^apid.interactions:([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$

Example CURIE
apid.interactions:P01116
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for apid.interactions.

Registry Name Metaprefix External Prefix
Identifiers.org miriam apid.interactions
Name-to-Thing n2t apid.interactions
Prefix Commons prefixcommons APID.INTERACTIONS
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE apid.interactions:P01116 is used to demonstrate the provides available for apid.interactions. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
APID Interactomes apid.interactions http://cicblade.dep.usal.es:8080/APID/Interactions.action?protein=P01116
Bioregistry bioregistry https://bioregistry.io/apid.interactions:P01116
Identifiers.org miriam https://identifiers.org/apid.interactions:P01116
Name-to-Thing n2t https://n2t.net/apid.interactions:P01116