3DMET is a database collecting three-dimensional structures of natural metabolites.

Prefix
3dmet
Keywords
chemical life science metabolite metabolomics structure
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in 3D Metabolites should match this regular expression:
^B\d{5}$

Example Local Unique Identifier
B00162   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from 3D Metabolites should match this regular expression:
^3dmet:B\d{5}$

Example CURIE
3dmet:B00162
Publications
Metaregistry 3D Metabolites

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for 3dmet with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext 3DMET
EDAM Ontology edam 2635
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5ab0n7
Identifiers.org Identifiers.org logo miriam 3dmet
Name-to-Thing Name-to-Thing logo n2t 3dmet
Prefix Commons prefixcommons 3dmet
Wikidata Property Wikidata Property logo wikidata P2796
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE 3dmet:B00162 is used to demonstrate the provides available for 3dmet. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
3D Metabolites 3dmet http://www.3dmet.dna.affrc.go.jp/cgi/show_data.php?acc=B00162
Bioregistry bioregistry https://bioregistry.io/3dmet:B00162
Identifiers.org miriam https://identifiers.org/3dmet:B00162
Name-to-Thing n2t https://n2t.net/3dmet:B00162