3DMET is a database collecting three-dimensional structures of natural metabolites.

chemical life science metabolite metabolomics structure
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in 3D Metabolites should match this regular expression:

Example Local Unique Identifier
B00162   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from 3D Metabolites should match this regular expression:

Example CURIE
Metaregistry 3D Metabolites

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for 3dmet with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext 3DMET
EDAM Ontology edam 2635
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.5ab0n7
Identifiers.org Identifiers.org logo miriam 3dmet
Name-to-Thing Name-to-Thing logo n2t 3dmet
Prefix Commons prefixcommons 3dmet
Wikidata Property Wikidata Property logo wikidata P2796

Providers are various services that resolve CURIEs to URLs. The example CURIE 3dmet:B00162 is used to demonstrate the provides available for 3dmet. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
3D Metabolites 3dmet http://www.3dmet.dna.affrc.go.jp/cgi/show_data.php?acc=B00162
Bioregistry bioregistry https://bioregistry.io/3dmet:B00162
Identifiers.org miriam https://identifiers.org/3dmet:B00162
Name-to-Thing n2t https://n2t.net/3dmet:B00162