biocontext:
  is_identifiers: true
  is_obo: false
  prefix: 3DMET
  uri_format: http://identifiers.org/3dmet/$1
edam:
  description: Identifier of a metabolite from the 3DMET database.
  name: Compound ID (3DMET)
  obsolete: false
  prefix: '2635'
fairsharing:
  abbreviation: 3DMET
  description: 3DMET is a database of three-dimensional structures of natural metabolites.
  homepage: http://www.3dmet.dna.affrc.go.jp/
  name: Three-Dimensional Structure Database of Natural Metabolites
  prefix: FAIRsharing.5ab0n7
  publications:
  - doi: 10.1021/ci300309k
    pubmed_id: 23293959
    title: 'Three-Dimensional Structure Database of Natural Metabolites (3DMET): A
      Novel Database of Curated 3D Structures.'
  subjects:
  - Life Science
  - Metabolomics
mappings:
  biocontext: 3DMET
  edam: '2635'
  fairsharing: FAIRsharing.5ab0n7
  miriam: 3dmet
  n2t: 3dmet
  prefixcommons: 3dmet
  wikidata: P2796
miriam:
  deprecated: false
  description: 3DMET is a database collecting three-dimensional structures of natural
    metabolites.
  homepage: http://www.3dmet.dna.affrc.go.jp/
  id: '00000066'
  name: 3DMET
  namespaceEmbeddedInLui: false
  pattern: ^B\d{5}$
  prefix: 3dmet
  sampleId: B00162
  uri_format: http://www.3dmet.dna.affrc.go.jp/cgi/show_data.php?acc=$1
n2t:
  description: 3DMET is a database collecting three-dimensional structures of natural
    metabolites.
  example: B00162
  homepage: http://www.3dmet.dna.affrc.go.jp/
  name: 3DMET database
  namespaceEmbeddedInLui: false
  pattern: ^B\d{5}$
  prefix: 3dmet
  uri_format: http://www.3dmet.dna.affrc.go.jp/cgi/show_data.php?acc=$1
name: 3D Metabolites
prefixcommons:
  description: 3DMET is a database of three-dimensional structures of natural metabolites.
  example: B00162
  homepage: http://www.3dmet.dna.affrc.go.jp
  keywords:
  - chemical
  - metabolite
  - structure
  miriam: 3dmet
  name: Three-Dimensional Structure Database of Natural Metabolites
  pattern: ^B\d{5}$
  prefix: 3dmet
  pubmed_ids:
  - '23293959'
  - '29892514'
publications:
- doi: 10.2142/biophysico.15.0_87
  pmc: PMC5992871
  pubmed: '29892514'
  title: 'Chemical curation to improve data accuracy: recent development of the 3DMET
    database.'
  year: 2018
- doi: 10.1021/ci300309k
  pubmed: '23293959'
  title: 'Three-dimensional structure database of natural metabolites (3DMET): a novel
    database of curated 3D structures.'
  year: 2013
- doi: 10.1021/ci300309k
  pubmed: '23293959'
  title: 'Three-Dimensional Structure Database of Natural Metabolites (3DMET): A Novel
    Database of Curated 3D Structures.'
- pubmed: '23293959'
- pubmed: '29892514'
- doi: 10.1021/ci300309k
  pubmed: '23293959'
  title: 'Three-Dimensional Structure Database of Natural Metabolites (3DMET): A Novel
    Database of Curated 3D Structures.'
- pubmed: '23293959'
- pubmed: '29892514'
wikidata:
  database: Q23948774
  prefix: P2796