The registry contains metadata about ontologies, controlled vocabularies, and resources including their preferred prefix, name, description, homepage, mappings to other registries, and more. An alternate view over the registry by keywords can be found here.
Anyone can suggest improvements, request a new prefix, or make pull requests to update the underlying database, which is stored in JSON on GitHub where the community can engage in an open review process.
| Name | Prefix | Description |
| 3D Metabolites | _3dmet |
3DMET is a database collecting three-dimensional structures of natural metabolites. |
| 4D Nucleome Data Portal Biosource | _4dn.biosource |
The 4D Nucleome Data Portal hosts data generated by the 4DN Network and other reference nucleomics data sets. |
| 4D Nucleome Data Portal Experiment Replicate | _4dn.replicate |
Database portal containing replicate experiments of different assays and samples. |
| AAindex | aaindex |
Identifier of an entry from the AAindex database. |
| Amphibian gross anatomy | aao |
A structured controlled vocabulary of the anatomy of Amphibians. |
| Abcam | abcam |
Vendor for assays, cells, and antibodies. |
| AntiBodies Chemically Defined database | abcd |
The ABCD (AntiBodies Chemically Defined) database is a manually curated depository of sequenced antibodies. |
| Applied Biological Materials cell line products | abm |
Cell line collections (Providers). |
| Annotated Regulatory Binding Sites | abs |
The database of Annotated regulatory Binding Sites (from orthologous promoters), ABS, is a public database of known binding sites identified in promoters of orthologous vertebrate genes that have been manually curated from bibliography. |
| AntiBody Sequence Database | absd |
The AntiBody Sequence Database is a public dataset for antibody sequence data. |