The database of Annotated regulatory Binding Sites (from orthologous promoters), ABS, is a public database of known binding sites identified in promoters of orthologous vertebrate genes that have been manually curated from bibliography.

biology gene interaction regulation
Enrique Blanco   0000-0001-6261-7370
Pattern for Local Unique Identifiers

Local identifiers in Annotated Regulatory Binding Sites should match this regular expression:

Example Local Unique Identifier
A0014   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Annotated Regulatory Binding Sites should match this regular expression:

Example CURIE
2006 ABS: a database of Annotated regulatory Binding Sites from orthologous promoters
Metaregistry Annotated Regulatory Binding Sites

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 4 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext ABS
EDAM EDAM Ontology logo edam 2741
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.7mnebr logo miriam abs
N2T Name-to-Thing logo n2t abs
Pathguide Pathguide logo pathguide 217
Prefix Commons Prefix Commons logo prefixcommons abs

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier A0014 is used to demonstrate the providers available for Annotated Regulatory Binding Sites. A guide for curating additional providers can be found here.

Name Metaprefix URI
Annotated Regulatory Binding Sites abs
Bioregistry bioregistry miriam
Name-to-Thing n2t
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF