The Pathway Interaction Database is a highly-structured, curated collection of information about known human biomolecular interactions and key cellular processes assembled into signaling pathways. This datatype provides access to pathway information.

Prefix

pid.pathway

Alternative Prefixes

pid

Keywords

biopax gene ontology pathway protein small molecule

License

http://www.cancer.gov/global/web/policies/allpages#5

Links

Homepage OBO OWL OBO JSON

Publications

2008 PID: the Pathway Interaction Database

Pattern for Local Unique Identifiers

Local identifiers in NCI Pathway Interaction Database: Pathway should match this regular expression:
^\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$

Example Local Unique Identifier

eff796f3-6195-11e5-8ac5-06603eb7f303   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from NCI Pathway Interaction Database: Pathway should match this regular expression:
^pid\.pathway:\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$

Example CURIE

pid.pathway:eff796f3-6195-11e5-8ac5-06603eb7f303

Contact

Carl F. Schaefer   0000-0002-5941-3390

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 4 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier eff796f3-6195-11e5-8ac5-06603eb7f303 is used to demonstrate the providers available for NCI Pathway Interaction Database: Pathway. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.