The Pathway Interaction Database is a highly-structured, curated collection of information about known human biomolecular interactions and key cellular processes assembled into signaling pathways. This datatype provides access to pathway information.
pid.pathway
Local identifiers in NCI Pathway Interaction Database: Pathway should match this
regular expression:
^\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$
Compact URIs (CURIEs) constructed from NCI Pathway Interaction Database: Pathway should match
this regular expression:
^pid\.pathway:\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$
The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 5 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PID.PATHWAY
|
|
EDAM | edam |
2344
|
|
FAIRSharing | fairsharing |
FAIRsharing.ncgh1j
|
|
Identifiers.org | miriam |
pid.pathway
|
|
N2T | n2t |
pid.pathway
|
|
Pathguide | pathguide |
119
|
|
Prefix Commons | prefixcommons |
pid
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier eff796f3-6195-11e5-8ac5-06603eb7f303
is used to demonstrate the providers
available for NCI Pathway Interaction Database: Pathway. A guide for curating additional providers can be found
here.
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pid:eff796f3-6195-11e5-8ac5-06603eb7f303 |