PANDIT is a collection of multiple sequence alignments and phylogenetic trees covering many common protein domains.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the pfam prefix. For all use cases, you should use pfam instead of pandit.

Prefix

pandit

Keywords

classification dna protein sequence structure

Links

Homepage

Publications

https://bioregistry.io/pubmed:16381879

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

PF00004   Resolve

Example CURIE

pandit:PF00004

Contact

Missing Contact

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A summary of the relations in the Bioregistry schema can be found here.

Provides

pfam

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier PF00004 is used to demonstrate the providers available for Protein and Associated NucleotideDomains with Inferred Trees. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.