nmrCV is a controlled vocabulary to deliver standardized descriptors for the open mark-up language for NMR raw and spectrum data, sanctioned by the metabolomics standards initiative msi.

Prefix

nmr

Preferred Prefix

NMR

Alternative Prefixes

nmrcv

Keywords

nmr obo ontology owl

Version

1.1.0

Links

Homepage OWL

Contact

Daniel Schober   0000-0001-8014-6648   DSchober

Pattern for Local Unique Identifiers

Local identifiers in NMR-instrument specific component of metabolomics investigations should match this regular expression:
^\d+$

Example Local Unique Identifier

1000003   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from NMR-instrument specific component of metabolomics investigations should match this regular expression:
^NMR:\d+$

Example CURIE

NMR:1000003

MIRIAM Namespace Embedded in LUI

The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For NMR-instrument specific component of metabolomics investigations, the banana looks like NMR:. Therefore, you may see local unique identifiers for this resource that look like NMR:1000003 (instead of the canonical form 1000003) and CURIEs for this resource that look like NMR:NMR:1000003 (instead of the canonical form NMR:1000003). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.

A summary of the relations in the Bioregistry schema can be found here.

In Collection

NFDI4Chem Collection

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 2 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/NMR_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 1000003 is used to demonstrate the providers available for NMR-instrument specific component of metabolomics investigations. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.