The Molecular Signatures Database (MSigDB) is a collection of annotated gene sets for use with GSEA software. From this web site, you can
msigdb
Local identifiers in Molecular Signatures Database should match this
regular expression:
^M\d+$
Compact URIs (CURIEs) constructed from Molecular Signatures Database should match
this regular expression:
^msigdb:M\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
Biolink | biolink |
MSigDB
|
|
Integbio | integbio |
nbdc02550
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
msigdb:M1
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
Molecular Signatures Database | msigdb |
https://biopragmatics.github.io/providers/msigdb/M1 |
Bioregistry | bioregistry |
https://bioregistry.io/msigdb:M1 |