Registry Minimum Anformation About a Phylogenetic Analysis Ontology

The MIAPA ontology is intended to be an application ontology for the purpose of semantic annotation of phylogenetic data according to the requirements and recommendations of the Minimum Information for A Phylogenetic Analysis (MIAPA) metadata reporting standard. The ontology leverages (imports) primarily from the CDAO (Comparative Data Analysis Ontology), PROV (W3C Provenance Ontology), and SWO (Software Ontology, which includes the EDAM ontologies) ontologies. It adds some assertions of its own, as well as some classes and individuals that may eventually get pushed down into one of the respective source ontologies. This ontology is maintained at http://github.com/miapa/miapa, and requests for changes or additions should be filed at the issue tracker there. The discussion list is at miapa-discuss@googlegroups.com. Further resources about MIAPA can be found at the project's main page at http://evoio.org/wiki/MIAPA.

Prefix
miapa
Preferred Prefix
MIAPA
Keywords
life science obo ontology phylogenetics phylogeny
License
CC0-1.0
Links
Homepage Repository OWL
Contact
Hilmar Lapp   0000-0001-9107-0714   hlapp
Pattern for Local Unique Identifiers

Local identifiers in Minimum Anformation About a Phylogenetic Analysis Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000010   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Minimum Anformation About a Phylogenetic Analysis Ontology should match this regular expression:
^MIAPA:\d{7}$

Example CURIE
MIAPA:0000010
Publications
2006 Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA)
Metaregistry Minimum Anformation About a Phylogenetic Analysis Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl MIAPA
BioContext biocontext MIAPA
BioPortal BioPortal Prefixes logo bioportal MIAPA
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.ca48xs
OBO Foundry OBO Foundry logo obofoundry miapa
OLS Ontology Lookup Service logo ols miapa
OntoBee OntoBee logo ontobee MIAPA
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/MIAPA_$1

Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000010 is used to demonstrate the providers available for Minimum Anformation About a Phylogenetic Analysis Ontology. A guide for curating additional providers can be found here.

Name Metaprefix URI
Minimum Anformation About a Phylogenetic Analysis Ontology miapa http://purl.obolibrary.org/obo/MIAPA_0000010
Minimum Anformation About a Phylogenetic Analysis Ontology (RDF) rdf http://purl.obolibrary.org/obo/MIAPA_0000010
Bioregistry bioregistry https://bioregistry.io/miapa:0000010
OBO Foundry obofoundry http://purl.obolibrary.org/obo/MIAPA_0000010
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/miapa/terms?iri=http://purl.obolibrary.org/obo/MIAPA_0000010
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/MIAPA/?p=classes&conceptid=http://purl.obolibrary.org/obo/MIAPA_0000010