The MIAPA ontology is intended to be an application ontology for the purpose of semantic annotation of phylogenetic data according to the requirements and recommendations of the Minimum Information for A Phylogenetic Analysis (MIAPA) metadata reporting standard. The ontology leverages (imports) primarily from the CDAO (Comparative Data Analysis Ontology), PROV (W3C Provenance Ontology), and SWO (Software Ontology, which includes the EDAM ontologies) ontologies. It adds some assertions of its own, as well as some classes and individuals that may eventually get pushed down into one of the respective source ontologies. This ontology is maintained at http://github.com/miapa/miapa, and requests for changes or additions should be filed at the issue tracker there. The discussion list is at miapa-discuss@googlegroups.com. Further resources about MIAPA can be found at the project's main page at http://evoio.org/wiki/MIAPA.

Prefix

miapa

Preferred Prefix

MIAPA

Keywords

life science obo ontology phylogenetics phylogeny

License

CC0-1.0

Links

Homepage Repository OWL

Contact

Hilmar Lapp   0000-0001-9107-0714   hlapp

Pattern for Local Unique Identifiers

Local identifiers in Minimum Anformation About a Phylogenetic Analysis Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0000010   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Minimum Anformation About a Phylogenetic Analysis Ontology should match this regular expression:
^MIAPA:\d{7}$

Example CURIE

MIAPA:0000010

Publications

2006 Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA)

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/MIAPA_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000010 is used to demonstrate the providers available for Minimum Anformation About a Phylogenetic Analysis Ontology. A guide for curating additional providers can be found here.