The RESID Database of Protein Modifications is a comprehensive collection of annotations and structures for protein modifications including amino-terminal, carboxyl-terminal and peptide chain cross-link post-translational modifications.

Prefix
resid
Preferred Prefix
RESID
Keywords
obo ontology protein small molecule structure
Links
Homepage
Contact
John Garavelli   0000-0002-4131-735X
Pattern for Local Unique Identifiers

Local identifiers in Protein covalent bond should match this regular expression:
^AA\d{4}$

Example Local Unique Identifier
AA0001   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein covalent bond should match this regular expression:
^RESID:AA\d{4}$

Example CURIE
RESID:AA0001
Publications
2004 Annotation of post-translational modifications in the Swiss-Prot knowledge base
Ontology

A summary of the relations in the Bioregistry schema can be found here.

In Collection
ChEBI Data Sources
Metaregistry Protein covalent bond

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext RESID
EDAM EDAM Ontology logo edam 2619
GO Gene Ontology Registry logo go RESID
Identifiers.org Identifiers.org logo miriam resid
N2T Name-to-Thing logo n2t resid
OBO Foundry OBO Foundry logo obofoundry resid
Prefix Commons Prefix Commons logo prefixcommons resid
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/RESID_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE RESID:AA0001 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Protein covalent bond resid https://proteininformationresource.org/cgi-bin/resid?id=AA0001
Protein covalent bond (RDF) rdf http://purl.obolibrary.org/obo/RESID_AA0001
Bioregistry bioregistry https://bioregistry.io/resid:AA0001
Identifiers.org miriam https://identifiers.org/resid:AA0001
OBO Foundry obofoundry http://purl.obolibrary.org/obo/RESID_AA0001
Name-to-Thing n2t https://n2t.net/resid:AA0001
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/resid:AA0001