A structured controlled vocabulary of concrete protein names and generic (abstract) protein names. This ontology is a INOH pathway annotation ontology, one of a set of ontologies intended to be used in pathway data annotation to ease data integration. IMR is part of the BioPAX working group.

Prefix

imr

Preferred Prefix

IMR

Keywords

life science ontology protein small molecule

Links

Homepage

Publications

2008 The molecule role ontology: an ontology for annotation of signal transduction pathway molecules in the scientific literature

Pattern for Local Unique Identifiers

Local identifiers in Molecule role (INOH Protein name/family name ontology) should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0000001   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Molecule role (INOH Protein name/family name ontology) should match this regular expression:
^IMR:\d{7}$

Example CURIE

IMR:0000001

Pattern for RDF URIs

http://purl.obolibrary.org/obo/IMR_$1

Example RDF URI

http://purl.obolibrary.org/obo/IMR_0000001

Contact

INOH curators

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000001 is used to demonstrate the providers available for Molecule role (INOH Protein name/family name ontology). Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.