Logo for Human Disease Ontology The Disease Ontology has been developed as a standardized ontology for human disease with the purpose of providing the biomedical community with consistent, reusable and sustainable descriptions of human disease terms, phenotype characteristics and related medical vocabulary disease concepts.

Prefix
doid
Preferred Prefix
DOID
Alternative Prefixes
do
Keywords
biomedical science classification disease disease phenotype disease process modeling genetic disorder human infection life science mental health obo ontology
Version
2024-08-29
License
CC0-1.0
Links
Homepage Repository OBO OWL OBO JSON
Contact
Lynn Schriml   0000-0001-8910-9851   lschriml
Pattern for Local Unique Identifiers

Local identifiers in Human Disease Ontology should match this regular expression:
^\d+$

Example Local Unique Identifier
0110974   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Human Disease Ontology should match this regular expression:
^DOID:\d+$

Example CURIE
DOID:0110974
MIRIAM Namespace Embedded in LUI
The legacy MIRIAM standard for generating CURIEs with this resource annotates the namespaceEmbeddedInLUI as true. This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known as a banana) and therefore look like a CURIE. For Human Disease Ontology, the banana looks like DOID:. Therefore, you may see local unique identifiers for this resource that look like DOID:0110974 (instead of the canonical form 0110974) and CURIEs for this resource that look like DOID:DOID:0110974 (instead of the canonical form DOID:0110974). The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
Publications
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Appears In (2) (bioregistry.schema:0000018 )
CLO SCDO
In Collection
ASKEM Epidemiology Prefixes
Metaregistry Human Disease Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 14 mappings to external registries for this resource with 6 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl DOID
BARTOC Basic Register of Thesauri, Ontologies & Classifications logo bartoc 576
BioContext biocontext DOID
BioPortal BioPortal Prefixes logo bioportal DOID
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.8b6wfq
Integbio Integbio logo integbio nbdc00261
Identifiers.org Identifiers.org logo miriam doid
N2T Name-to-Thing logo n2t doid
OBO Foundry OBO Foundry logo obofoundry doid
OLS Ontology Lookup Service logo ols doid
OntoBee OntoBee logo ontobee DOID
Prefix Commons Prefix Commons logo prefixcommons do
TogoID togoid Doid
Wikidata Wikidata Property logo wikidata P699
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/DOID_$1

Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0110974 is used to demonstrate the providers available for Human Disease Ontology. A guide for curating additional providers can be found here.

Name Metaprefix URI
Human Disease Ontology doid http://purl.obolibrary.org/obo/DOID_0110974
Human Disease Ontology (RDF) rdf http://purl.obolibrary.org/obo/DOID_0110974
Bioregistry bioregistry https://bioregistry.io/doid:0110974
Identifiers.org miriam https://identifiers.org/DOID:0110974
OBO Foundry obofoundry http://purl.obolibrary.org/obo/DOID_0110974
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/doid/terms?iri=http://purl.obolibrary.org/obo/DOID_0110974
Name-to-Thing n2t https://n2t.net/doid:0110974
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/DOID/?p=classes&conceptid=http://purl.obolibrary.org/obo/DOID_0110974
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/do:0110974
hdo Human Disease Ontology at Northwestern University http://disease-ontology.org/term/DOID:0110974
purl Legacy PURL http://purl.org/obo/owl/DOID#DOID_0110974