appears_in:
- clo
- scdo
banana: DOID
contact:
  email: lynn.schriml@gmail.com
  github: lschriml
  name: Lynn Schriml
  orcid: 0000-0001-8910-9851
depends_on: []
deprecated: false
description: The Disease Ontology has been developed as a standardized ontology for
  human disease with the purpose of providing the biomedical community with consistent,
  reusable and sustainable descriptions of human disease terms, phenotype characteristics
  and related medical vocabulary disease concepts.
download_json: http://purl.obolibrary.org/obo/doid.json
download_obo: https://github.com/DiseaseOntology/HumanDiseaseOntology/raw/main/src/ontology/doid.obo
download_owl: http://purl.obolibrary.org/obo/doid.owl
example: 0110974
example_extras: []
homepage: https://disease-ontology.org
keywords:
- biomedical science
- classification
- disease
- disease course
- disease phenotype
- genetic disorder
- health/disease
- human
- infection process
- life science
- mental health
- obo
- ontology
- ontology/terminology/nomenclature
- phenotype
license: CC0-1.0
logo: https://disease-ontology.org/media/images/DO_logo_teal.png
mappings:
  aberowl: DOID
  bartoc: '576'
  biocontext: DOID
  bioportal: DOID
  fairsharing: FAIRsharing.8b6wfq
  integbio: nbdc00261
  miriam: doid
  n2t: doid
  obofoundry: doid
  ols: doid
  ontobee: DOID
  prefixcommons: do
  togoid: Doid
  wikidata: P699
  wikidata.entity: Q5282129
name: Human Disease Ontology
namespace_in_lui: true
pattern: ^\d+$
preferred_prefix: DOID
prefix: doid
providers:
- code: bio2rdf
  description: Bio2RDF is an open-source project that uses Semantic Web technologies
    to build and provide the largest network of Linked Data for the Life Sciences.
    Bio2RDF defines a set of simple conventions to create RDF(S) compatible Linked
    Data from a diverse set of heterogeneously formatted sources obtained from multiple
    data providers.
  homepage: https://bio2rdf.org
  name: Bio2RDF
  uri_format: http://bio2rdf.org/do:$1
- code: hdo
  description: Human Disease Ontology at Northwestern University
  homepage: http://disease-ontology.org/
  name: Human Disease Ontology at Northwestern University
  uri_format: http://disease-ontology.org/term/DOID:$1
- code: purl
  description: Legacy PURLs for DOID, including the redundant DOID_
  homepage: http://purl.org/obo/owl/
  name: Legacy PURL
  uri_format: http://purl.org/obo/owl/DOID#DOID_$1
- code: purl2
  description: Legacy PURLs for DOID, not including the redundant DOID_
  homepage: http://purl.org/obo/owl/
  name: Legacy PURL
  uri_format: http://purl.org/obo/owl/DOID#$1
publications:
- doi: 10.1093/nar/gkad1051
  pubmed: '37953304'
  title: 'The DO-KB Knowledgebase: a 20-year journey developing the disease open science
    ecosystem'
  year: 2023
- doi: 10.1093/nar/gkab1063
  pmc: PMC8728220
  pubmed: '34755882'
  title: The Human Disease Ontology 2022 update
  year: 2022
- doi: 10.1093/bib/bbab191
  pmc: PMC8195003
  pubmed: '34015823'
  title: COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker
    data model
  year: 2021
- doi: 10.7554/elife.52614
  pmc: PMC7077981
  pubmed: '32180547'
  title: Wikidata as a knowledge graph for the life sciences
  year: 2020
- doi: 10.1093/nar/gky1036
  pmc: PMC6323956
  pubmed: '30407590'
  title: 'ECO, the Evidence & Conclusion Ontology: community standard for evidence
    information'
  year: 2019
- doi: 10.1093/nar/gky1032
  pmc: PMC6323977
  pubmed: '30407550'
  title: 'Human Disease Ontology 2018 update: classification, content and workflow
    expansion'
  year: 2019
- doi: 10.1242/dmm.032839
  pmc: PMC5897730
  pubmed: '29590633'
  title: 'Disease Ontology: improving and unifying disease annotations across species'
  year: 2018
- doi: 10.1093/database/baw015
  pmc: PMC4795929
  pubmed: '26989148'
  title: Wikidata as a semantic framework for the Gene Wiki initiative
  year: 2016
- doi: 10.1016/j.ajhg.2015.05.020
  pmc: PMC4572507
  pubmed: '26119816'
  title: 'The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease'
  year: 2015
- doi: 10.1007/s00335-015-9576-9
  pmc: PMC4602048
  pubmed: '26093607'
  title: 'The Disease Ontology: fostering interoperability between biological and
    clinical human disease-related data'
  year: 2015
- doi: 10.1093/database/bav032
  pmc: PMC4385274
  pubmed: '25841438'
  title: Generating a focused view of disease ontology cancer terms for pan-cancer
    data integration and analysis
  year: 2015
- doi: 10.1093/nar/gku1011
  pmc: PMC4383880
  pubmed: '25348409'
  title: 'Disease Ontology 2015 update: an expanded and updated database of human
    diseases for linking biomedical knowledge through disease data'
  year: 2014
- doi: 10.1093/nar/gkr972
  pmc: PMC3245088
  pubmed: '22080554'
  title: 'Disease Ontology: a backbone for disease semantic integration'
  year: 2011
- doi: 10.1186/1471-2164-10-s1-s6
  pmc: PMC2709267
  pubmed: '19594883'
  title: Annotating the human genome with Disease Ontology
  year: 2009
- doi: 10.1093/bioinformatics/btp193
  pmc: PMC2687947
  pubmed: '19478018'
  title: 'From disease ontology to disease-ontology lite: statistical methods to adapt
    a general-purpose ontology for the test of gene-ontology associations'
  year: 2009
rdf_uri_format: http://purl.obolibrary.org/obo/DOID_$1
repository: https://github.com/DiseaseOntology/HumanDiseaseOntology
synonyms:
- do
uri_format: http://purl.obolibrary.org/obo/DOID_$1
version: '2026-02-28'
