The Ontology of Coronavirus Infectious Disease (CIDO) is a community-driven open-source biomedical ontology in the area of coronavirus infectious disease. The CIDO is developed to provide standardized human- and computer-interpretable annotation and representation of various coronavirus infectious diseases, including their etiology, transmission, pathogenesis, diagnosis, prevention, and treatment.

Prefix

cido

Preferred Prefix

CIDO

Keywords

bioinformatics covid-19 disease drug drug discovery drug interaction drug repositioning epidemiology infection obo ontology virology

Version

2024-02-16

License

CC-BY-4.0

Links

Homepage Repository OWL

Contact

Yongqun Oliver He   0000-0001-9189-9661   yongqunh

Pattern for Local Unique Identifiers

Local identifiers in Coronavirus Infectious Disease Ontology should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0000005   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Coronavirus Infectious Disease Ontology should match this regular expression:
^CIDO:\d{7}$

Example CURIE

CIDO:0000005

Publications

• 2022 A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology
• 2020 CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/CIDO_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0000005 is used to demonstrate the providers available for Coronavirus Infectious Disease Ontology. A guide for curating additional providers can be found here.