APID (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). Interactome data includes a report on quality levels and coverage over the proteomes for each organism included. APID integrates PPIs from primary databases of molecular interactions (BIND, BioGRID, DIP, HPRD, IntAct, MINT) and also from experimentally resolved 3D structures (PDB) where more than two distinct proteins have been identified. This collection references protein interactors, through a UniProt identifier.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of apid.interactions.

Prefix
apid.interactions
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in APID Interactomes should match this regular expression:
^([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$

Example Local Unique Identifier
P01116   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from APID Interactomes should match this regular expression:
^apid\.interactions:([A-N,R-Z][0-9]([A-Z][A-Z, 0-9][A-Z, 0-9][0-9]){1,2})|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])(\.\d+)?$

Example CURIE
apid.interactions:P01116
References
GitHub PR https://github.com/biopragmatics/bioregistry/pull/1098
Contributors
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Provides
uniprot
Metaregistry APID Interactomes

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext APID.INTERACTIONS
Identifiers.org Identifiers.org logo miriam apid.interactions
N2T Name-to-Thing logo n2t apid.interactions
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier P01116 is used to demonstrate the providers available for APID Interactomes. A guide for curating additional providers can be found here.

Name Metaprefix URI
APID Interactomes apid.interactions http://cicblade.dep.usal.es:8080/APID/Interactions.action?protein=P01116
Bioregistry bioregistry https://bioregistry.io/apid.interactions:P01116
Identifiers.org miriam https://identifiers.org/apid.interactions:P01116
Name-to-Thing n2t https://n2t.net/apid.interactions:P01116