eggNOG (evolutionary genealogy of genes: Non-supervised Orthologous Groups) is a database of orthologous groups of genes. The orthologous groups are annotated with functional description lines (derived by identifying a common denominator for the genes based on their various annotations), with functional categories (i.e derived from the original COG/KOG categories).
eggnog
Local identifiers in eggNOG should match this
regular expression:
^\w+$
Compact URIs (CURIEs) constructed from eggNOG should match
this regular expression:
^eggnog:\w+$
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 5 mappings to external registries with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
EGGNOG
|
|
Identifiers.org
|
miriam |
eggnog
|
|
N2T
|
n2t |
eggnog
|
|
|
Prefix Commons
|
prefixcommons |
eggnog
|
|
|
UniProt
|
uniprot |
DB-0152
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier veNOG12876 is used to demonstrate the providers
available for eggNOG. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| eggNOG | eggnog |
http://eggnog.embl.de/version_3.0/cgi/search.py?search_term_0=veNOG12876 |
| Bioregistry | bioregistry |
https://bioregistry.io/eggnog:veNOG12876 |
| Identifiers.org | miriam |
https://identifiers.org/eggnog:veNOG12876 |
| Name-to-Thing | n2t |
https://n2t.net/eggnog:veNOG12876 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/eggnog:veNOG12876 |