DASHR reports the annotation, expression and evidence for specific RNA processing (cleavage specificity scores/entropy) of human sncRNA genes, precursor and mature sncRNA products across different human tissues and cell types. DASHR integrates information from multiple existing annotation resources for small non-coding RNAs, including microRNAs (miRNAs), Piwi-interacting (piRNAs), small nuclear (snRNAs), nucleolar (snoRNAs), cytoplasmic (scRNAs), transfer (tRNAs), tRNA fragments (tRFs), and ribosomal RNAs (rRNAs). These datasets were obtained from non-diseased human tissues and cell types and were generated for studying or profiling small non-coding RNAs. This collection references RNA expression.

Prefix
dashr.expression
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in DASHR expression should match this regular expression:
^(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example Local Unique Identifier
hsa-mir-200a   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from DASHR expression should match this regular expression:
^dashr\.expression:(hsa-(let|mir)-\w+(-\w+)?)|(piR-\d+)|(chr\w+.tRNA\d+-\w+)|(chr\w+.tRNA\d+-\w+-tRF\d)|((SNORD|SNORA|ACA|HBII|HBI|U)(-)?\w+)|(HY\d\+(-L\d+)?)|((LSU|SSU|5S)(-rRNA_Hsa)?(-L\d+)?)$

Example CURIE
dashr.expression:hsa-mir-200a
Metaregistry DASHR expression

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext DASHR.EXPRESSION
Identifiers.org Identifiers.org logo miriam dashr.expression
N2T Name-to-Thing logo n2t dashr.expression
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE dashr.expression:hsa-mir-200a is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
DASHR expression dashr.expression https://dashr1.lisanwanglab.org/entry/hsa-mir-200a#hsa-mir-200a#exprPerTissueTable
Bioregistry bioregistry https://bioregistry.io/dashr.expression:hsa-mir-200a
Identifiers.org miriam https://identifiers.org/dashr.expression:hsa-mir-200a
Name-to-Thing n2t https://n2t.net/dashr.expression:hsa-mir-200a