CAPS-DB is a structural classification of helix-cappings or caps compiled from protein structures. The regions of the polypeptide chain immediately preceding or following an alpha-helix are known as Nt- and Ct cappings, respectively. Caps extracted from protein structures have been structurally classified based on geometry and conformation and organized in a tree-like hierarchical classification where the different levels correspond to different properties of the caps.
caps
Local identifiers in CAPS-DB should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from CAPS-DB should match
this regular expression:
^caps:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
CAPS
|
|
Identifiers.org | miriam |
caps
|
|
N2T | n2t |
caps
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 434
is used to demonstrate the providers
available for CAPS-DB. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
CAPS-DB | caps |
http://www.bioinsilico.org/cgi-bin/CAPSDB/getCAPScluster?nidcl=434 |
Bioregistry | bioregistry |
https://bioregistry.io/caps:434 |
Identifiers.org | miriam |
https://identifiers.org/caps:434 |
Name-to-Thing | n2t |
https://n2t.net/caps:434 |