An ontology for glycans based on GlyTouCan, but organized by subsumption.

Prefix

gno

Preferred Prefix

GNO

Alternative Prefixes

gnome

Keywords

obo ontology

Version

2024-05-21

License

CC-BY-4.0

Links

Homepage Repository OBO OWL OBO JSON

Contact

Nathan Edwards   0000-0001-5168-3196   edwardsnj

Pattern for Local Unique Identifiers

Local identifiers in Glycan Naming and Subsumption Ontology should match this regular expression:
^(\d{8}|(\w+\d+\w+))$

Example Local Unique Identifiers

10004892   Resolve
G99373GG   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Glycan Naming and Subsumption Ontology should match this regular expression:
^GNO:(\d{8}|(\w+\d+\w+))$

Example CURIEs

GNO:10004892
GNO:G99373GG

Publications

2021 GNOme - Glycan Naming and Subsumption Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 1 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/GNO_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 10004892 is used to demonstrate the providers available for Glycan Naming and Subsumption Ontology. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.