The EcoGene database contains updated information about the E. coli K-12 genome and proteome sequences, including extensive gene bibliographies. A major EcoGene focus has been the re-evaluation of translation start sites.

Prefix

ecogene

Keywords

genome protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in Database of Escherichia coli Sequence and Function should match this regular expression:
^EG\d+$

Example Local Unique Identifier

EG10173   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Database of Escherichia coli Sequence and Function should match this regular expression:
^ecogene:EG\d+$

Example CURIE

ecogene:EG10173

Publications

2000 EcoGene: a genome sequence database for Escherichia coli K-12

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier EG10173 is used to demonstrate the providers available for Database of Escherichia coli Sequence and Function. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.