The dbEST contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms.

Prefix

dbest

Keywords

cdna/est dna repository sequence

Links

Homepage

Publications

1993 dbEST--database for "expressed sequence tags"

Pattern for Local Unique Identifiers

Local identifiers in dbEST should match this regular expression:
^([A-Z]+)?\d+(\.\d+)?$

Example Local Unique Identifier

BP100000   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from dbEST should match this regular expression:
^dbest:([A-Z]+)?\d+(\.\d+)?$

Example CURIE

dbest:BP100000

Contact

Todd M Lowe   0000-0003-3253-6021

A summary of the relations in the Bioregistry schema can be found here.

Has incoming URI collisions

The following resources share a URI format string with dbest:
bdgp.est

When generating an extended prefix map, their respective CURIE prefixes and URI prefixes are merged into the record for dbest. If you believe that these are distinct semantic spaces and should not be merged, please open a new issue on the Bioregistry issue tracker for discussion.

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 8 mappings to external registries with 4 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier BP100000 is used to demonstrate the providers available for dbEST. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.