The Yeast Transcription Factor Specificity Compendium (YeTFasCO) is a database of transcription factor specificities for the yeast Saccharomyces cerevisiae in Position Frequency Matrix (PFM) or Position Weight Matrix (PWM) formats.
- Prefix
yetfasco- Links
- Homepage
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in YeTFasCo should match this regular expression:
^\w+\_\d+(\.\d+)?$ - Example Local Unique Identifier
- YOR172W_571.0 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from YeTFasCo should match this regular expression:
^yetfasco:\w+\_\d+(\.\d+)?$ - Example CURIE
- yetfasco:YOR172W_571.0
Contacts
- Contact
- Missing Contact
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 3 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
YETFASCO
|
|
Identifiers.org
|
miriam |
yetfasco
|
|
N2T
|
n2t |
yetfasco
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier YOR172W_571.0 is used to demonstrate the providers
available for YeTFasCo. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| YeTFasCo | yetfasco |
http://yetfasco.ccbr.utoronto.ca/showPFM.php?mot=YOR172W_571.0 |
| Bioregistry | bioregistry |
https://bioregistry.io/yetfasco:YOR172W_571.0 |
| Identifiers.org | miriam |
https://identifiers.org/yetfasco:YOR172W_571.0 |
| Name-to-Thing | n2t |
https://n2t.net/yetfasco:YOR172W_571.0 |