WOrfDB (Worm ORFeome DataBase) contains data from the cloning of complete set of predicted protein-encoding Open Reading Frames (ORFs) of Caenorhabditis elegans. This collection describes experimentally defined transcript structures of unverified genes through RACE (Rapid Amplification of cDNA Ends).

Prefix
worfdb
Keywords
cdna/est dna sequence
Links
Homepage
Publications
https://bioregistry.io/pubmed:15489327
https://bioregistry.io/pubmed:12679813
https://bioregistry.io/pubmed:12519990
https://bioregistry.io/pubmed:11242119
Identifier Standards
Pattern for Local Unique Identifiers

Local identifiers in Worfdb should match this regular expression:
^\w+(\.\d+)?$

Example Local Unique Identifier
T01B6.1   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Worfdb should match this regular expression:
^worfdb:\w+(\.\d+)?$

Example CURIE
worfdb:T01B6.1
Contacts
Contact
Missing Contact
Mappings to External Registries

Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 6 mappings to external registries with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext WORFDB
Integbio Integbio logo integbio nbdc00738
Identifiers.org Identifiers.org logo miriam worfdb
N2T Name-to-Thing logo n2t worfdb
NCBI National Center for Biotechnology Information Registry logo ncbi WorfDB
Prefix Commons Prefix Commons logo prefixcommons worfdb
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier T01B6.1 is used to demonstrate the providers available for Worfdb. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Provider Name Provider Code URI
Worfdb worfdb http://worfdb.dfci.harvard.edu/html/index.php?search_type=name&page=showresultrc&race_query=T01B6.1
Bioregistry bioregistry https://bioregistry.io/worfdb:T01B6.1
Identifiers.org miriam https://identifiers.org/worfdb:T01B6.1
Name-to-Thing n2t https://n2t.net/worfdb:T01B6.1
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Provider Name Provider Code URL
Bio2RDF bio2rdf http://bio2rdf.org/worfdb:T01B6.1