Registry WikiPathways Types

Suggest

Types used in WikiPathways RDF

Prefix: wikipathways.type
Alternative Prefixes: wikipathways.types wptypes
Keywords: ontology
Links: Homepage Repository OWL Request Discussion @wikipathways@fosstodon.org

Identifier Standards

Pattern for Local Unique Identifiers: Missing LUI pattern
Example Local Unique Identifier: Arrow Resolve
Example CURIE: wikipathways.type:Arrow
Pattern for RDF URIs: http://vocabularies.wikipathways.org/wpTypes#$1
Example RDF URI: http://vocabularies.wikipathways.org/wpTypes#Arrow

Contacts

Contact: Egon Willighagen 0000-0001-7542-0286 egonw
Contributors: submitter Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Arrow is used to demonstrate the providers available for WikiPathways Types. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
WikiPathways Types	`wikipathways.type`	http://vocabularies.wikipathways.org/wpTypes#Arrow
WikiPathways Types (RDF)	`rdf`	http://vocabularies.wikipathways.org/wpTypes#Arrow
Bioregistry	`bioregistry`	https://bioregistry.io/wikipathways.type:Arrow

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("wikipathways.types")
'wikipathways.type'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("wikipathways.type")
{'wikipathways.types', 'wptypes'}

This name annotation was originally annotated in Bioregistry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("wikipathways.type")
'WikiPathways Types'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("wikipathways.type")
'https://vocabularies.wikipathways.org/wpTypes'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("wikipathways.type")
'https://github.com/wikipathways/WpVocabularies'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("wikipathways.type")
'https://github.com/wikipathways/WpVocabularies/raw/refs/heads/master/docs/wpTypes.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("wikipathways.type")
'Egon Willighagen'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("wikipathways.type")
'egon.willighagen@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("wikipathways.type")
'egonw'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("wikipathways.type")
'0000-0001-7542-0286'