SMIDs (Small Molecule Identifiers) represent gene-style identifiers for small molecules newly identified in C. elegans and other nematodes. SMIDs aim to make life easier for describing biogenic small molecules in metabolomic and genomic applications.
- Prefix
smid- Alternative Prefixes
- SMID-DB
- Links
- Homepage
Identifier Standards
- Pattern for Local Unique Identifiers
-
Local identifiers in C. elegans Small Molecule Identifier Database identifier should match this regular expression:
^\d+$ - Example Local Unique Identifiers
-
137
Resolve
98 Resolve - Pattern for CURIES
-
Compact URIs (CURIEs) constructed from C. elegans Small Molecule Identifier Database identifier should match this regular expression:
^smid:\d+$ - Example CURIEs
-
smid:137
smid:98
Contacts
- Contact
- Missing Contact
- Contributors
-
submitter
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Ontology
A summary of the relations in the Bioregistry schema can be found here.
- In Collection (1)
- ChEBI Data Sources
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 137 is used to demonstrate the providers
available for C. elegans Small Molecule Identifier Database identifier. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| C. elegans Small Molecule Identifier Database identifier | smid |
https://smid-db.org/smid/137 |
| Bioregistry | bioregistry |
https://bioregistry.io/smid:137 |