RiceCyc is a catalog of known and/or predicted biochemical pathways from rice (Oryza sativa). Pathways and genes presented in this catalog are primarily based on the annotations carried out by Gramene database project
- Prefix
ricecyc- Keywords
- gene pathway
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- PWY-1042 Resolve
- Example CURIE
- ricecyc:PWY-1042
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry Rice Metabolic Pathways
The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Pathguide
|
pathguide |
227
|
|
Prefix Commons
|
prefixcommons |
ricecyc
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier PWY-1042 is used to demonstrate the providers
available for Rice Metabolic Pathways. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| Rice Metabolic Pathways | ricecyc |
http://pathway.gramene.org/RICE/NEW-IMAGE?type=PATHWAY&object=PWY-1042 |
| Bioregistry | bioregistry |
https://bioregistry.io/ricecyc:PWY-1042 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/ricecyc:PWY-1042 |