A structured controlled vocabulary for cross-linking reagents used with proteomics mass spectrometry.
- Prefix
xlmod- Preferred Prefix
XLMOD- Keywords
- chemical biology experimental measurement gas chromatography mass spectrometry assay mass spectrum metabolomics obo omics ontology reagent
- Version
- 2019-10-28
- License
- CC-BY-3.0
- Links
- Homepage Repository OBO OWL
- Contact
- Gerhard Mayer 0000-0002-1767-2343 germa
- Pattern for Local Unique Identifiers
-
Local identifiers in HUPO-PSI cross-linking and derivatization reagents controlled vocabulary should match this regular expression:
^\d{5}$ - Example Local Unique Identifier
- 00050 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from HUPO-PSI cross-linking and derivatization reagents controlled vocabulary should match this regular expression:
^XLMOD:\d{5}$ - Example CURIE
- XLMOD:00050
Metaregistry HUPO-PSI cross-linking and derivatization reagents controlled vocabulary
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
AberOWL
|
aberowl |
XLMOD
|
|
BioPortal
|
bioportal |
XLMOD
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.6ccbe6
|
|
OBO Foundry
|
obofoundry |
xlmod
|
|
OLS
|
ols |
xlmod
|
|
OntoBee
|
ontobee |
XLMOD
|
RDF Information
When using this resource in RDF, the following URI format should be used:
http://purl.obolibrary.org/obo/XLMOD_$1
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 00050 is used to demonstrate the providers
available for HUPO-PSI cross-linking and derivatization reagents controlled vocabulary. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.