TarBase stores microRNA (miRNA) information for miRNA–gene interactions, as well as miRNA- and gene-related facts to information specific to the interaction and the experimental validation methodologies used.

Prefix
tarbase
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in TarBase should match this regular expression:
^[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$

Example Local Unique Identifier
hsa-let-7a-2-3p   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from TarBase should match this regular expression:
^tarbase:[a-z]{3}\-(mir|let|lin)\-\w+(\-\w+\-\w+)$

Example CURIE
tarbase:hsa-let-7a-2-3p
Metaregistry TarBase

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for tarbase.

Registry Name Metaprefix External Prefix
BioContext biocontext TARBASE
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.a0k4cd
Identifiers.org Identifiers.org logo miriam tarbase
Name-to-Thing Name-to-Thing logo n2t tarbase
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE tarbase: is used to demonstrate the provides available for tarbase. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
TarBase tarbase http://diana.imis.athena-innovation.gr/DianaTools/index.php?r=tarbase/index&mirnas=hsa-let-7a-2-3p
Bioregistry bioregistry https://bioregistry.io/tarbase:hsa-let-7a-2-3p
Identifiers.org miriam https://identifiers.org/tarbase:hsa-let-7a-2-3p
Name-to-Thing n2t https://n2t.net/tarbase:hsa-let-7a-2-3p