The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana. This is the reference gene model for a given locus.
tair.gene
Local identifiers in TAIR Gene should match this
regular expression:
^\d{7}$
Compact URIs (CURIEs) constructed from TAIR Gene should match
this regular expression:
^tair\.gene:\d{7}$
Gene:
.
Therefore, you may see local unique identifiers for this resource that look like
Gene:2200934
(instead of the canonical form 2200934
) and CURIEs for this resource that look like
tair.gene:Gene:2200934
(instead of the canonical form tair.gene:2200934
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
A summary of the relations in the Bioregistry schema can be found here.
bfo:0000050
)
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
TAIR.GENE
|
|
Identifiers.org | miriam |
tair.gene
|
|
N2T | n2t |
tair.gene
|
|
Prefix Commons | prefixcommons |
tair.gene
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 2200934
is used to demonstrate the providers
available for TAIR Gene. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
TAIR Gene | tair.gene |
http://arabidopsis.org/servlets/TairObject?accession=Gene:2200934 |
Bioregistry | bioregistry |
https://bioregistry.io/tair.gene:2200934 |
Identifiers.org | miriam |
https://identifiers.org/tair.gene:Gene:2200934 |
Name-to-Thing | n2t |
https://n2t.net/tair.gene:2200934 |
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/tair.gene:2200934 |