Registry Rice Genome Annotation Project
The objective of this project is to provide high quality annotation for the rice genome Oryza sativa spp japonica cv Nipponbare. All genes are annotated with functional annotation including expression data, gene ontologies, and tagged lines.
- Prefix
ricegap- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Rice Genome Annotation Project should match this regular expression:
^LOC\_Os\d{1,2}g\d{5}$ - Example Local Unique Identifier
- LOC_Os02g13300 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Rice Genome Annotation Project should match this regular expression:
^ricegap:LOC\_Os\d{1,2}g\d{5}$ - Example CURIE
- ricegap:LOC_Os02g13300
Metaregistry Rice Genome Annotation Project
The metaregistry provides mappings between the Bioregistry and other registries. There are
3 mappings to external registries for ricegap with
1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
RICEGAP
|
|
Identifiers.org
|
miriam |
ricegap
|
|
Name-to-Thing
|
n2t |
ricegap
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
ricegap:LOC_Os02g13300
is used to demonstrate the provides available for
ricegap. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.