TyPon provides a comprehensive description of the existing microbial typing methods for the identification of bacterial Isolates and their classification. Such a description constitutes an universal format for the exchange of information on the microbial typing field, providing a vehicle for the integration of the numerous disparate online databases. In its current version, TyPon describes most used microbial typing methods but it is, and always will be, a work in progress given the constant advances in the microbial typing field.

Prefix

phyloviz.typon

Keywords

ontology

Links

Homepage Repository OWL Request Discussion

Publications

2014 TypOn: the microbial typing ontology

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

Allele   Resolve

Example CURIE

phyloviz.typon:Allele

Pattern for RDF URIs

http://purl.phyloviz.net/ontology/typon#$1

Example RDF URI

http://purl.phyloviz.net/ontology/typon#Allele

Contact

Missing Contact

Contributors

submitter Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Allele is used to demonstrate the providers available for The Microbial Typing Ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.