Bioregistry - Platynereis Developmental Stages

Registry Platynereis Developmental Stages

Life cycle stages for Platynereis dumerilii

Prefix: pdumdv
Preferred Prefix: PdumDv
Alternative Prefixes: PdumDv
Version: 2020-03-10
License: CC BY 3.0
Links: Homepage Repository OBO OWL
Contact: Frédéric Bastian 0000-0002-9415-5104 fbastian
Pattern for Local Unique Identifiers: Local identifiers in Platynereis Developmental Stages should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0001410 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Platynereis Developmental Stages should match this regular expression:
^pdumdv:\d{7}$
Example CURIE: pdumdv:0001410

Metaregistry Platynereis Developmental Stages

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for pdumdv with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`PDUMDV`
BioContext	`biocontext`	`PDUMDV`
BioPortal Prefixes	`bioportal`	`PDUMDV`
FAIRSharing	`fairsharing`	`FAIRsharing.493qns`
OBO Foundry	`obofoundry`	`pdumdv`
Ontology Lookup Service	`ols`	`pdumdv`
OntoBee	`ontobee`	`PdumDv`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE pdumdv:0001410 is used to demonstrate the provides available for pdumdv. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Platynereis Developmental Stages	`pdumdv`	http://purl.obolibrary.org/obo/PDUMDV_0001410
Bioregistry	`bioregistry`	https://bioregistry.io/pdumdv:0001410
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/PdumDv_0001410
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols/ontologies/pdumdv/terms?iri=http://purl.obolibrary.org/obo/PdumDv_0001410
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/PDUMDV/?p=classes&conceptid=http://purl.obolibrary.org/obo/PdumDv_0001410

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("PdumDv")
'pdumdv'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("pdumdv")
{'PdumDv'}

Get the version:

>>> import bioregistry as br
>>> br.get_version("pdumdv")
'2020-03-10'

Get the license:

>>> import bioregistry as br
>>> br.get_license("pdumdv")
'CC BY 3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("pdumdv")
'https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("pdumdv")
'https://github.com/obophenotype/developmental-stage-ontologies'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("pdumdv")
'http://purl.obolibrary.org/obo/pdumdv.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("pdumdv")
'http://purl.obolibrary.org/obo/pdumdv.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("pdumdv")
'Frédéric Bastian'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("pdumdv")
'frederic.bastian@unil.ch'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("pdumdv")
'fbastian'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("pdumdv")
'0000-0002-9415-5104'