Registry Ontology of Host-Microbiome Interactions

OHMI is a biomedical ontology that represents the entities and relations in the domain of host-microbiome interactions.

Prefix: ohmi
Preferred Prefix: OHMI
Keywords: life science obo ontology
Version: 2019-09-17
License: CC-BY-4.0
Links: Homepage Repository OWL
Contact: Yongqun Oliver He 0000-0001-9189-9661 yongqunh
Pattern for Local Unique Identifiers: Local identifiers in Ontology of Host-Microbiome Interactions should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0000460 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Ontology of Host-Microbiome Interactions should match this regular expression:
^ohmi:\d{7}$
Example CURIE: ohmi:0000460

Metaregistry Ontology of Host-Microbiome Interactions

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for ohmi with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`OHMI`
BioContext	`biocontext`	`OHMI`
BioPortal	`bioportal`	`OHMI`
FAIRSharing	`fairsharing`	`FAIRsharing.cz9cnp`
OBO Foundry	`obofoundry`	`ohmi`
OLS	`ols`	`ohmi`
OntoBee	`ontobee`	`OHMI`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE ohmi:0000460 is used to demonstrate the provides available for ohmi. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
Ontology of Host-Microbiome Interactions	`ohmi`	http://purl.obolibrary.org/obo/OHMI_0000460
Bioregistry	`bioregistry`	https://bioregistry.io/ohmi:0000460
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/OHMI_0000460
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols/ontologies/ohmi/terms?iri=http://purl.obolibrary.org/obo/OHMI_0000460
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/OHMI/?p=classes&conceptid=http://purl.obolibrary.org/obo/OHMI_0000460

Get the version:

>>> import bioregistry as br
>>> br.get_version("ohmi")
'2019-09-17'

Get the license:

>>> import bioregistry as br
>>> br.get_license("ohmi")
'CC-BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("ohmi")
'https://github.com/ohmi-ontology/ohmi'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("ohmi")
'https://github.com/ohmi-ontology/ohmi'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("ohmi")
'http://purl.obolibrary.org/obo/ohmi.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("ohmi")
'Yongqun Oliver He'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("ohmi")
'yongqunh@med.umich.edu'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("ohmi")
'yongqunh'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("ohmi")
'0000-0001-9189-9661'