OGG is a biological ontology in the area of genes and genomes. OGG uses the Basic Formal Ontology (BFO) as its upper level ontology. This OGG document contains the genes and genomes of a list of selected organisms, including human, two viruses (HIV and influenza virus), and bacteria (B. melitensis strain 16M, E. coli strain K-12 substrain MG1655, M. tuberculosis strain H37Rv, and P. aeruginosa strain PAO1). More OGG information for other organisms (e.g., mouse, zebrafish, fruit fly, yeast, etc.) may be found in other OGG subsets.

Prefix

ogg

Preferred Prefix

OGG

Keywords

biology gene gene name genome life science obo ontology

Version

1.0.59

License

CC-BY-3.0

Links

Homepage Repository OWL

Contact

Yongqun Oliver He   0000-0001-9189-9661   yongqunh

Pattern for Local Unique Identifiers

Local identifiers in The Ontology of Genes and Genomes should match this regular expression:
^\d+$

Example Local Unique Identifier

3000887619   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from The Ontology of Genes and Genomes should match this regular expression:
^OGG:\d+$

Example CURIE

OGG:3000887619

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/OGG_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 3000887619 is used to demonstrate the providers available for The Ontology of Genes and Genomes. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.