The NMPDR provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens Campylobacter, Listeria, Staphylococcus, Streptococcus, and Vibrio; as well as the STD pathogens Chlamydiaceae, Haemophilus, Mycoplasma, Neisseria, Treponema, and Ureaplasma.
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- fig|306254.1.peg.183 Resolve
- Example CURIE
- nmpdr:fig|306254.1.peg.183
Contacts
- Contact
- Missing Contact
- Reviewer
-
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 2 mappings to external registries with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
NCBI
|
ncbi |
NMPDR
|
|
Prefix Commons
|
prefixcommons |
nmpdr
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier fig|306254.1.peg.183 is used to demonstrate the providers
available for National Microbial Pathogen Data Resource. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| National Microbial Pathogen Data Resource | nmpdr |
http://www.nmpdr.org/FIG/wiki/rest.cgi/NmpdrPlugin/SeedViewer?page=Annotation;feature=fig|306254.1.peg.183 |
| Bioregistry | bioregistry |
https://bioregistry.io/nmpdr:fig|306254.1.peg.183 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Provider Name | Provider Code | URL |
|---|---|---|
| Bio2RDF | bio2rdf |
http://bio2rdf.org/nmpdr:fig|306254.1.peg.183 |