Registry NIF Standard Ontology: Neurolex

The NeuroLex project is a dynamic lexicon of terms used in neuroscience. It is supported by the Neuroscience Information Framework project and incorporates information from the NIF standardised ontology (NIFSTD), and its predecessor, the Biomedical Informatics Research Network Lexicon (BIRNLex).

Prefix: neurolex
Alternative Prefixes: nlx NLX
Keywords: classification neuroscience ontology
License: CC BY-4.0
Links: Homepage Repository @SciCrunch
Contact: Tom Gillespie 0000-0002-7509-4802 tgbugs
Pattern for Local Unique Identifiers: Local identifiers in NIF Standard Ontology: Neurolex should match this regular expression:
^\d+$
Example Local Unique Identifier: 4 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from NIF Standard Ontology: Neurolex should match this regular expression:
^neurolex:\d+$
Example CURIE: neurolex:4
Publications: 2008 The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience.

Ontology

Part Of: nif (not directly registered)

Metaregistry NIF Standard Ontology: Neurolex

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for neurolex with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
BioContext	`biocontext`	`NEUROLEX`
Identifiers.org	`miriam`	`neurolex`
Name-to-Thing	`n2t`	`neurolex`
Prefix Commons	`prefixcommons`	`neurolex`

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE neurolex:4 is used to demonstrate the provides available for neurolex. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name	Metaprefix	URI
NIF Standard Ontology: Neurolex	`neurolex`	http://uri.neuinfo.org/nif/nifstd/nlx_4
Bioregistry	`bioregistry`	https://bioregistry.io/neurolex:4
Identifiers.org	`miriam`	https://identifiers.org/neurolex:4
Name-to-Thing	`n2t`	https://n2t.net/neurolex:4

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("nlx")
'neurolex'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("neurolex")
{'nlx', 'NLX'}

Get the license:

>>> import bioregistry as br
>>> br.get_license("neurolex")
'CC BY-4.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("neurolex")
'https://github.com/SciCrunch/NIF-Ontology'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("neurolex")
'https://github.com/SciCrunch/NIF-Ontology'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("neurolex")
'Tom Gillespie'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("neurolex")
'tgbugs@gmail.com'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("neurolex")
'tgbugs'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("neurolex")
'0000-0002-7509-4802'