Registry TubercuList knowledge base

Mycobrowser is a resource that provides both in silico generated and manually reviewed information within databases dedicated to the complete genomes of Mycobacterium tuberculosis, Mycobacterium leprae, Mycobacterium marinum and Mycobacterium smegmatis. This collection references Mycobacteria tuberculosis information.

Prefix
myco.tuber
Alternative Prefixes
TubercuList
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in TubercuList knowledge base should match this regular expression:
^Rv\d{4}(A|B|c)?$

Example Local Unique Identifier
Rv1908c   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from TubercuList knowledge base should match this regular expression:
^myco\.tuber:Rv\d{4}(A|B|c)?$

Example CURIE
myco.tuber:Rv1908c
Metaregistry TubercuList knowledge base

The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for myco.tuber with 2 unique external prefixes.

Registry Name Metaprefix External Prefix
BioContext biocontext MYCO.TUBER
Identifiers.org Identifiers.org logo miriam myco.tuber
Name-to-Thing Name-to-Thing logo n2t myco.tuber
National Center for Biotechnology Information Registry ncbi TubercuList
Prefix Commons prefixcommons tuberculist
UniProt Cross-ref database uniprot TubercuList
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE myco.tuber:Rv1908c is used to demonstrate the provides available for myco.tuber. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
TubercuList knowledge base myco.tuber http://tuberculist.epfl.ch/quicksearch.php?gene+name=Rv1908c
Bioregistry bioregistry https://bioregistry.io/myco.tuber:Rv1908c
Identifiers.org miriam https://identifiers.org/myco.tuber:Rv1908c
Name-to-Thing n2t https://n2t.net/myco.tuber:Rv1908c