A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes

Preferred Prefix
Alternative Prefixes
anatomy biomedical science disease genetic strain histology mouse mutation obo ontology phenotype
Homepage Repository OBO OWL
Paul Schofield   0000-0002-5111-7263   PaulNSchofield
Pattern for Local Unique Identifiers

Local identifiers in Mouse pathology ontology should match this regular expression:

Example Local Unique Identifier
728   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Mouse pathology ontology should match this regular expression:

Example CURIE
2010 Pathbase and the MPATH ontology. Community resources for mouse histopathology
Metaregistry Mouse pathology ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl MPATH
BioContext biocontext MPATH
BioPortal BioPortal Prefixes logo bioportal MPATH
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.3wbgm0
Integbio Integbio logo integbio nbdc01568
OBO Foundry OBO Foundry logo obofoundry mpath
OLS Ontology Lookup Service logo ols mpath
OntoBee OntoBee logo ontobee MPATH
Prefix Commons Prefix Commons logo prefixcommons mpath
RDF Information

When using this resource in RDF, the following URI format should be used:



A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 728 is used to demonstrate the providers available for Mouse pathology ontology. A guide for curating additional providers can be found here.

Name Metaprefix URI
Mouse pathology ontology mpath http://purl.obolibrary.org/obo/MPATH_728
Mouse pathology ontology (RDF) rdf http://purl.obolibrary.org/obo/MPATH_728
Bioregistry bioregistry https://bioregistry.io/mpath:728
OBO Foundry obofoundry http://purl.obolibrary.org/obo/MPATH_728
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/mpath/terms?iri=http://purl.obolibrary.org/obo/MPATH_728
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/MPATH/?p=classes&conceptid=http://purl.obolibrary.org/obo/MPATH_728
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/mpath:728