A structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes

Prefix

mpath

Preferred Prefix

MPATH

Alternative Prefixes

MPATH

Keywords

anatomy biomedical science disease genetic strain histology mouse mutation obo ontology phenotype

Version

2020-05-19

License

CC-BY-3.0

Links

Homepage Repository OBO OWL

Contact

Paul Schofield   0000-0002-5111-7263   PaulNSchofield

Pattern for Local Unique Identifiers

Local identifiers in Mouse pathology ontology should match this regular expression:
^\d+$

Example Local Unique Identifier

728   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Mouse pathology ontology should match this regular expression:
^MPATH:\d+$

Example CURIE

MPATH:728

Publications

2010 Pathbase and the MPATH ontology. Community resources for mouse histopathology

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 3 unique external prefixes.

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/MPATH_$1

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 728 is used to demonstrate the providers available for Mouse pathology ontology. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.