ModelDB is a curated, searchable database of published models in the computational neuroscience domain. It accommodates models expressed in textual form, including procedural or declarative languages (e.g. C++, XML dialects) and source code written for any simulation environment.
modeldb
Local identifiers in ModelDB should match this
regular expression:
^\d+$
Compact URIs (CURIEs) constructed from ModelDB should match
this regular expression:
^modeldb:\d+$
The metaregistry provides mappings between the Bioregistry and other registries. There are
7 mappings to external registries for modeldb
with
4 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
MODELDB
|
|
EDAM Ontology | edam |
2669
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.5rb3fk
|
|
Identifiers.org
![]() |
miriam |
modeldb
|
|
Name-to-Thing
![]() |
n2t |
modeldb
|
|
Prefix Commons | prefixcommons |
modeldb
|
|
Registry of Research Data Repositories | re3data |
r3d100011330
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
modeldb:45539
is used to demonstrate the provides available for
modeldb
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
ModelDB | modeldb |
http://senselab.med.yale.edu/ModelDB/ShowModel.asp?model=45539 |
Bioregistry | bioregistry |
https://bioregistry.io/modeldb:45539 |
Identifiers.org | miriam |
https://identifiers.org/modeldb:45539 |
Name-to-Thing | n2t |
https://n2t.net/modeldb:45539 |