Registry ModelDB
ModelDB is a curated, searchable database of published models in the computational neuroscience domain. It accommodates models expressed in textual form, including procedural or declarative languages (e.g. C++, XML dialects) and source code written for any simulation environment.
- Prefix
modeldb- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in ModelDB should match this regular expression:
^\d+$ - Example Local Unique Identifier
- 45539 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from ModelDB should match this regular expression:
^modeldb:\d+$ - Example CURIE
- modeldb:45539
- Publications
- 2003 ModelDB: making models publicly accessible to support computational neuroscience.
Metaregistry ModelDB
The metaregistry provides mappings between the Bioregistry and other registries. There are
7 mappings to external registries for modeldb with
4 unique external prefixes.
| Registry Name | Metaprefix | External Prefix |
|---|---|---|
| BioContext | biocontext |
MODELDB
|
| EDAM Ontology | edam |
2669
|
FAIRSharing
|
fairsharing |
FAIRsharing.5rb3fk
|
Identifiers.org
|
miriam |
modeldb
|
Name-to-Thing
|
n2t |
modeldb
|
| Prefix Commons | prefixcommons |
modeldb
|
| Registry of Research Data Repositories | re3data |
r3d100011330
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
modeldb:45539
is used to demonstrate the provides available for
modeldb. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| ModelDB | modeldb |
http://senselab.med.yale.edu/ModelDB/ShowModel.asp?model=45539 |
| Bioregistry | bioregistry |
https://bioregistry.io/modeldb:45539 |
| Identifiers.org | miriam |
https://identifiers.org/modeldb:45539 |
| Name-to-Thing | n2t |
https://n2t.net/modeldb:45539 |