ModelDB is a curated, searchable database of published models in the computational neuroscience domain. It accommodates models expressed in textual form, including procedural or declarative languages (e.g. C++, XML dialects) and source code written for any simulation environment.

Prefix

modeldb

Keywords

computational biology life science neurobiology

Links

Homepage @SenseLabProject

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in ModelDB should match this regular expression:
^\d+$

Example Local Unique Identifier

45539   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from ModelDB should match this regular expression:
^modeldb:\d+$

Example CURIE

modeldb:45539

Publications

• 1996 ModelDB: an environment for running and storing computational models and their results applied to neuroscience.
• 2016 Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience.
• 2004 ModelDB: A Database to Support Computational Neuroscience.
• 2003 ModelDB: making models publicly accessible to support computational neuroscience.

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for modeldb with 4 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE modeldb:45539 is used to demonstrate the provides available for modeldb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.