The GSC family of minimum information standards (checklists) – Minimum Information about any (x) Sequence (MIxS). MIxS identifiers are for terms describing an aspect of an environmental sample.

Comment

Some things to be decided before granting - [ ] should the prefix be mixs, gsc.mixs, MIxS, MIXS, ...? - [ ] MIxS terms are most commonly identified by a short computable stable label, e.g ph_regm. The GSC CIG team are creating numeric identifiers, e.g. MIXS:0001056 - Should we support both schemes? - If we do, should these be different prefixes? I would strongly recommend this. E.g. mixs.term:ph_regm, mixs:0001056. We can then have different regex patterns for both Additional notes: - The http://gensc.org/ns/mixs/ will likely changes to a w3id.org URI that will also serve as a semweb identifier - It currently redirects to the tdwg wiki but this is I assume temporary

Prefix

mixs

Keywords

ontology

Links

Homepage OWL

Contact

Ramona Walls   0000-0001-8815-0078   ramonawalls

Pattern for Local Unique Identifiers

Local identifiers in Minimal Information about any Sequence should match this regular expression:
^\d{7}$

Example Local Unique Identifier

0001056   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Minimal Information about any Sequence should match this regular expression:
^mixs:\d{7}$

Example CURIE

mixs:0001056

Publications

2011 Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications.

Contributors

• submitter Chris Mungall   0000-0002-6601-2165   cmungall
• contributor Chris Hunter   0000-0002-1335-0881   only1chunts

Reviewer

Charles Tapley Hoyt   0000-0003-4423-4370   cthoyt

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for mixs with 2 unique external prefixes.

Providers are various services that resolve CURIEs to URLs. The example CURIE mixs:0001056 is used to demonstrate the provides available for mixs. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Additional providers curated in the Bioregistry are listed here.