The miRBase database is a searchable database of published miRNA sequences and annotation. Each entry in the miRBase Sequence database represents a predicted hairpin portion of a miRNA transcript (termed mir in the database), with information on the location and sequence of the mature miRNA sequence (termed miR). Both hairpin and mature sequences are available for searching and browsing, and entries can also be retrieved by name, keyword, references and annotation. All sequence and annotation data are also available for download.
Identifier Standards
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- MIPF0000002 Resolve
- Example CURIE
- mirbase.family:MIPF0000002
Contacts
- Contact
-
Sam Griffiths-Jones
0000-0001-6043-807X
samgriffithsjones
- Contributors
-
submitter
Charles Tapley Hoyt
0000-0003-4423-4370
cthoyt
Mappings to External Registries
Mappings from records in Bioregistry to external registries comprises the metaregistry. This resource has 1 mapping to an external registry.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Wikidata (E)
|
wikidata.entity |
Q6826947
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier MIPF0000002 is used to demonstrate the providers
available for miRBase Families. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Provider Name | Provider Code | URI |
|---|---|---|
| miRBase Families | mirbase.family |
http://www.mirbase.org/cgi-bin/mirna_summary.pl?fam=MIPF0000002 |
| Bioregistry | bioregistry |
https://bioregistry.io/mirbase.family:MIPF0000002 |