MicrosporidiaDB is one of the databases that can be accessed through the EuPathDB (http://EuPathDB.org; formerly ApiDB) portal, covering eukaryotic pathogens of the genera Cryptosporidium, Giardia, Leishmania, Neospora, Plasmodium, Toxoplasma, Trichomonas and Trypanosoma. While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all these resources, and the opportunity to leverage orthology for searches across genera.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MicrosporidiaDB should match this regular expression:

Example Local Unique Identifier
ECU03_0820i   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MicrosporidiaDB should match this regular expression:

Example CURIE

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for microsporidia.

Registry Name Metaprefix External Prefix
Identifiers.org miriam microsporidia
Name-to-Thing n2t microsporidia
Prefix Commons prefixcommons MICROSPORIDIA

Providers are various services that resolve CURIEs to URLs. The example CURIE microsporidia:ECU03_0820i is used to demonstrate the provides available for microsporidia. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MicrosporidiaDB microsporidia http://microsporidiadb.org/micro/showRecord.do?name=GeneRecordClasses.GeneRecordClass&source_id=ECU03_0820i
Bioregistry bioregistry https://bioregistry.io/microsporidia:ECU03_0820i
Identifiers.org miriam https://identifiers.org/microsporidia:ECU03_0820i
Name-to-Thing n2t https://n2t.net/microsporidia:ECU03_0820i