The Molecular Interactions (MI) ontology forms a structured controlled vocabulary for the annotation of experiments concerned with protein-protein interactions. MI is developed by the HUPO Proteomics Standards Initiative.
mi
MI
Local identifiers in Molecular Interactions Controlled Vocabulary should match this
regular expression:
^\d{4}$
Compact URIs (CURIEs) constructed from Molecular Interactions Controlled Vocabulary should match
this regular expression:
^mi:\d{4}$
namespaceEmbeddedInLUI
as true.
This means that you may see local unique identifiers that include a redundant prefix and delimiter (also known
as a banana)
and therefore look like a CURIE. For Molecular Interactions Controlled Vocabulary, the banana looks like
MI:
.
Therefore, you may see local unique identifiers for this resource that look like
MI:0058
(instead of the canonical form 0058
) and CURIEs for this resource that look like
mi:MI:0058
(instead of the canonical form mi:0058
).
The Bioregistry will automatically strip off the banana when standardizing local unique identifiers and CURIEs.
The metaregistry provides mappings between the Bioregistry and other registries. There are
12 mappings to external registries for mi
with
5 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
AberOWL
![]() |
aberowl |
MI
|
|
BioContext | biocontext |
PSIMI
|
|
Biolink
|
biolink |
MI
|
|
BioPortal
![]() |
bioportal |
MI
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.8qzmtr
|
|
GO
![]() |
go |
PSI-MI
|
|
Identifiers.org
![]() |
miriam |
mi
|
|
N2T
![]() |
n2t |
psimi
|
|
OBO Foundry
![]() |
obofoundry |
mi
|
|
OLS
![]() |
ols |
mi
|
|
OntoBee
![]() |
ontobee |
MI
|
|
Prefix Commons
|
prefixcommons |
psi.mi
|
When using this resource in RDF, the following URI format should be used:
http://purl.obolibrary.org/obo/MI_$1
Providers are various services that resolve CURIEs to URLs. The example CURIE
mi:0058
is used to demonstrate the provides available for
mi
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/psi.mi:0058 |