The EBI Metagenomics service is an automated pipeline for the analysis and archiving of metagenomic data that aims to provide insights into the phylogenetic diversity as well as the functional and metabolic potential of a sample. Metagenomics is the study of all genomes present in any given environment without the need for prior individual identification or amplification. This collection references samples.

Prefix
mgnify.samp
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MGnify Sample should match this regular expression:
^[A-Z]+[0-9]+$

Example Local Unique Identifier
SRS086444   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MGnify Sample should match this regular expression:
^mgnify.samp:[A-Z]+[0-9]+$

Example CURIE
mgnify.samp:SRS086444
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for mgnify.samp.

Registry Name Metaprefix External Prefix
Identifiers.org miriam mgnify.samp
Name-to-Thing n2t mgnify.samp
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE mgnify.samp:SRS086444 is used to demonstrate the provides available for mgnify.samp. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MGnify Sample mgnify.samp https://www.ebi.ac.uk/metagenomics/samples/SRS086444
Bioregistry bioregistry https://bioregistry.io/mgnify.samp:SRS086444
Identifiers.org miriam https://identifiers.org/mgnify.samp:SRS086444
Name-to-Thing n2t https://n2t.net/mgnify.samp:SRS086444