MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references reactions.
metanetx.reaction
Local identifiers in MetaNetX reaction should match this
regular expression:
^(MNXR\d+|EMPTY)$
Compact URIs (CURIEs) constructed from MetaNetX reaction should match
this regular expression:
^metanetx\.reaction:(MNXR\d+|EMPTY)$
The metaregistry provides mappings between the Bioregistry and other registries. There are
4 mappings to external registries for metanetx.reaction
with
1 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
METANETX.REACTION
|
|
Biolink
|
biolink |
METANETX.REACTION
|
|
Identifiers.org
![]() |
miriam |
metanetx.reaction
|
|
N2T
![]() |
n2t |
metanetx.reaction
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
metanetx.reaction:MNXR101574
is used to demonstrate the provides available for
metanetx.reaction
. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Name | Metaprefix | URI |
---|---|---|
MetaNetX reaction | metanetx.reaction |
https://www.metanetx.org/equa_info/MNXR101574 |
Bioregistry | bioregistry |
https://bioregistry.io/metanetx.reaction:MNXR101574 |
Identifiers.org | miriam |
https://identifiers.org/metanetx.reaction:MNXR101574 |
Name-to-Thing | n2t |
https://n2t.net/metanetx.reaction:MNXR101574 |