MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references reactions.

Prefix
metanetx.reaction
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MetaNetX reaction should match this regular expression:
^(MNXR\d+|EMPTY)$

Example Local Unique Identifier
MNXR101574   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaNetX reaction should match this regular expression:
^metanetx.reaction:(MNXR\d+|EMPTY)$

Example CURIE
metanetx.reaction:MNXR101574
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for metanetx.reaction.

Registry Name Metaprefix External Prefix
Biolink Model Registry biolink METANETX.REACTION
Identifiers.org miriam metanetx.reaction
Name-to-Thing n2t metanetx.reaction
Prefix Commons prefixcommons METANETX.REACTION
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE metanetx.reaction:MNXR101574 is used to demonstrate the provides available for metanetx.reaction. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MetaNetX reaction metanetx.reaction https://www.metanetx.org/equa_info/MNXR101574
Bioregistry bioregistry https://bioregistry.io/metanetx.reaction:MNXR101574
Identifiers.org miriam https://identifiers.org/metanetx.reaction:MNXR101574
Name-to-Thing n2t https://n2t.net/metanetx.reaction:MNXR101574