MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references chemical or metabolic components.

Prefix
metanetx.chemical
Links
Homepage
Contact
Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MetaNetX chemical should match this regular expression:
^(MNXM\d+|BIOMASS|WATER)$

Example Local Unique Identifier
MNXM1723   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaNetX chemical should match this regular expression:
^metanetx.chemical:(MNXM\d+|BIOMASS|WATER)$

Example CURIE
metanetx.chemical:MNXM1723
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for metanetx.chemical.

Registry Name Metaprefix External Prefix
Identifiers.org miriam metanetx.chemical
Name-to-Thing n2t metanetx.chemical
Prefix Commons prefixcommons METANETX.CHEMICAL
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE metanetx.chemical:MNXM1723 is used to demonstrate the provides available for metanetx.chemical. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MetaNetX chemical metanetx.chemical https://www.metanetx.org/chem_info/MNXM1723
Bioregistry bioregistry https://bioregistry.io/metanetx.chemical:MNXM1723
Identifiers.org miriam https://identifiers.org/metanetx.chemical:MNXM1723
Name-to-Thing n2t https://n2t.net/metanetx.chemical:MNXM1723