MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references chemical or metabolic components.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MetaNetX chemical should match this regular expression:

Example Local Unique Identifier
MNXM1723   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaNetX chemical should match this regular expression:

Example CURIE
Metaregistry MetaNetX chemical

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext METANETX.CHEMICAL logo miriam metanetx.chemical
N2T Name-to-Thing logo n2t metanetx.chemical

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MNXM1723 is used to demonstrate the providers available for MetaNetX chemical. A guide for curating additional providers can be found here.

Name Metaprefix URI
MetaNetX chemical metanetx.chemical
Bioregistry bioregistry miriam
Name-to-Thing n2t