MetaNetX/MNXref integrates various information from genome-scale metabolic network reconstructions such as information on reactions, metabolites and compartments. This information undergoes a reconciliation process to minimise for discrepancies between different data sources, and makes the data accessible under a common namespace. This collection references chemical or metabolic components.

Missing Contact
Pattern for Local Unique Identifiers

Local identifiers in MetaNetX chemical should match this regular expression:

Example Local Unique Identifier
MNXM1723   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from MetaNetX chemical should match this regular expression:

Example CURIE
Metaregistry MetaNetX chemical

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext METANETX.CHEMICAL logo miriam metanetx.chemical
N2T Name-to-Thing logo n2t metanetx.chemical

Providers are various services that resolve CURIEs to URLs. The example CURIE metanetx.chemical:MNXM1723 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
MetaNetX chemical metanetx.chemical
Bioregistry bioregistry miriam
Name-to-Thing n2t